Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 AC125206.2-201ENSMUST00000217454 574 ntBASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mdc1Q5PSV9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mdc1Q5PSV9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Grk6-207ENSMUST00000225925 2769 ntBASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Gm13015-201ENSMUST00000118674 204 ntBASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mdc1Q5PSV9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Gm27437-201ENSMUST00000183429 107 ntBASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mdc1Q5PSV9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Gm27920-201ENSMUST00000183953 96 ntBASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mdc1Q5PSV9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mdc1Q5PSV9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Mdc1Q5PSV9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Mdc1Q5PSV9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mdc1Q5PSV9 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.14■□□□□ 0.82
Mdc1Q5PSV9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mdc1Q5PSV9 Gm16026-204ENSMUST00000162652 683 ntBASIC20.14■□□□□ 0.81
Mdc1Q5PSV9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mdc1Q5PSV9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mdc1Q5PSV9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms