Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 AA543401-201ENSMUST00000164248 1269 ntBASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Gm13365-201ENSMUST00000121188 973 ntBASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf43Q5NCP0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf43Q5NCP0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Gm44335-201ENSMUST00000196879 141 ntBASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Gm44297-201ENSMUST00000198304 141 ntBASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Gm44346-201ENSMUST00000198851 141 ntBASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms