Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.42■□□□□ 0.06
Scn2bQ56A07 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.42■□□□□ 0.06
Scn2bQ56A07 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn2bQ56A07 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn2bQ56A07 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scn2bQ56A07 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.39■□□□□ 0.05
Scn2bQ56A07 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Gm6257-201ENSMUST00000163864 910 ntBASIC15.39■□□□□ 0.05
Scn2bQ56A07 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.39■□□□□ 0.05
Scn2bQ56A07 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.39■□□□□ 0.05
Scn2bQ56A07 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn2bQ56A07 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.38■□□□□ 0.05
Scn2bQ56A07 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Gm17807-201ENSMUST00000186869 298 ntBASIC15.38■□□□□ 0.05
Scn2bQ56A07 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Scn2bQ56A07 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms