Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Gm27300-201ENSMUST00000184085 97 ntBASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Gm27335-201ENSMUST00000184758 97 ntBASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Gm45167-201ENSMUST00000208007 322 ntBASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp48Q3V0C5 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp48Q3V0C5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp48Q3V0C5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Gm44492-201ENSMUST00000197012 141 ntBASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp48Q3V0C5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp48Q3V0C5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp48Q3V0C5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp48Q3V0C5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp48Q3V0C5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp48Q3V0C5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.19■□□□□ 0.66
Usp48Q3V0C5 Gm18622-201ENSMUST00000219361 595 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms