Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf223Q3UV31 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rnf223Q3UV31 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf223Q3UV31 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Gm14722-201ENSMUST00000118943 689 ntBASIC15.07■□□□□ 0
Rnf223Q3UV31 Gm8318-201ENSMUST00000182954 872 ntBASIC15.07■□□□□ 0
Rnf223Q3UV31 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.07■□□□□ 0
Rnf223Q3UV31 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.07■□□□□ 0
Rnf223Q3UV31 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rnf223Q3UV31 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.07■□□□□ 0
Rnf223Q3UV31 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rnf223Q3UV31 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rnf223Q3UV31 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 App-207ENSMUST00000227737 2827 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Mir3113-201ENSMUST00000175478 76 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Gm10175-201ENSMUST00000086013 645 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rnf223Q3UV31 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.06■□□□□ 0
Rnf223Q3UV31 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rnf223Q3UV31 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf223Q3UV31 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf223Q3UV31 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.05■□□□□ 0
Rnf223Q3UV31 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Rnf223Q3UV31 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.05■□□□□ -0
Rnf223Q3UV31 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.05■□□□□ -0
Rnf223Q3UV31 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.05■□□□□ -0
Rnf223Q3UV31 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.05■□□□□ -0
Rnf223Q3UV31 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rnf223Q3UV31 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf223Q3UV31 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.04■□□□□ -0
Rnf223Q3UV31 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.04■□□□□ -0
Rnf223Q3UV31 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf223Q3UV31 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.04■□□□□ -0
Rnf223Q3UV31 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms