Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.82■□□□□ 0.12
Naf1Q3UMQ8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Naf1Q3UMQ8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Gm27300-201ENSMUST00000184085 97 ntBASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.8■□□□□ 0.12
Naf1Q3UMQ8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Naf1Q3UMQ8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms