Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Gm25745-201ENSMUST00000174945 133 ntBASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Asic1-205ENSMUST00000228185 1818 ntBASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Brf2Q3UAW9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Gm27867-201ENSMUST00000184778 125 ntBASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.67□□□□□ -0.06
Brf2Q3UAW9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brf2Q3UAW9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.66□□□□□ -0.06
Brf2Q3UAW9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Gm15372-201ENSMUST00000120729 834 ntBASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Gm12497-201ENSMUST00000138778 237 ntBASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms