Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Gm11543-201ENSMUST00000120758 370 ntBASIC18.31■□□□□ 0.52
Col5a2Q3U962 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Gm38225-201ENSMUST00000194001 393 ntBASIC18.31■□□□□ 0.52
Col5a2Q3U962 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col5a2Q3U962 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Col5a2Q3U962 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.29■□□□□ 0.52
Col5a2Q3U962 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col5a2Q3U962 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.28■□□□□ 0.52
Col5a2Q3U962 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col5a2Q3U962 Gm22189-201ENSMUST00000103822 86 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 Gm8410-201ENSMUST00000117225 605 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 Gm15483-201ENSMUST00000120338 456 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col5a2Q3U962 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.27■□□□□ 0.52
Col5a2Q3U962 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Col5a2Q3U962 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col5a2Q3U962 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.27■□□□□ 0.51
Col5a2Q3U962 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col5a2Q3U962 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Gm44344-201ENSMUST00000200287 129 ntBASIC18.26■□□□□ 0.51
Col5a2Q3U962 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Gm25857-201ENSMUST00000082788 129 ntBASIC18.26■□□□□ 0.51
Col5a2Q3U962 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.26■□□□□ 0.51
Col5a2Q3U962 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col5a2Q3U962 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms