Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm27646-201ENSMUST00000183989 110 ntBASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ctdnep1Q3TP92 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Birc2-201ENSMUST00000054878 378 ntBASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ctdnep1Q3TP92 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ctdnep1Q3TP92 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ctdnep1Q3TP92 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ctdnep1Q3TP92 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ctdnep1Q3TP92 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Gm15358-201ENSMUST00000119249 520 ntBASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ctdnep1Q3TP92 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ctdnep1Q3TP92 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Gm6296-201ENSMUST00000222599 943 ntBASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms