Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Trim63Q38HM4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim63Q38HM4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim63Q38HM4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim63Q38HM4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim63Q38HM4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim63Q38HM4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms