Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Sox4Q06831 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.28■□□□□ 0.04
Sox4Q06831 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.28■□□□□ 0.04
Sox4Q06831 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.28■□□□□ 0.04
Sox4Q06831 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.28■□□□□ 0.04
Sox4Q06831 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Gm15590-201ENSMUST00000078419 552 ntBASIC15.28■□□□□ 0.04
Sox4Q06831 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.28■□□□□ 0.04
Sox4Q06831 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.28■□□□□ 0.04
Sox4Q06831 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.28■□□□□ 0.04
Sox4Q06831 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sox4Q06831 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox4Q06831 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.27■□□□□ 0.04
Sox4Q06831 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.27■□□□□ 0.04
Sox4Q06831 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Sox4Q06831 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sox4Q06831 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sox4Q06831 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sox4Q06831 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sox4Q06831 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.27■□□□□ 0.03
Sox4Q06831 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Sox4Q06831 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sox4Q06831 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Sox4Q06831 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Gm13036-201ENSMUST00000117799 748 ntBASIC15.26■□□□□ 0.03
Sox4Q06831 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.26■□□□□ 0.03
Sox4Q06831 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.26■□□□□ 0.03
Sox4Q06831 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Sox4Q06831 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox4Q06831 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.26■□□□□ 0.03
Sox4Q06831 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Sox4Q06831 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Prob1-201ENSMUST00000097619 3021 ntBASIC15.26■□□□□ 0.03
Sox4Q06831 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sox4Q06831 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.26■□□□□ 0.03
Sox4Q06831 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox4Q06831 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.25■□□□□ 0.03
Sox4Q06831 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Sox4Q06831 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sox4Q06831 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.25■□□□□ 0.03
Sox4Q06831 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox4Q06831 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox4Q06831 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.25■□□□□ 0.03
Sox4Q06831 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox4Q06831 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.25■□□□□ 0.03
Sox4Q06831 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Sox4Q06831 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.25■□□□□ 0.03
Sox4Q06831 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms