Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.42■□□□□ 0.7
Smarcc1P97496 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Gm25287-201ENSMUST00000103846 110 ntBASIC19.42■□□□□ 0.7
Smarcc1P97496 Gm22918-201ENSMUST00000103855 110 ntBASIC19.42■□□□□ 0.7
Smarcc1P97496 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Gm2272-201ENSMUST00000194903 582 ntBASIC19.42■□□□□ 0.7
Smarcc1P97496 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.42■□□□□ 0.7
Smarcc1P97496 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarcc1P97496 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcc1P97496 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarcc1P97496 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Smarcc1P97496 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.41■□□□□ 0.7
Smarcc1P97496 Gm8318-201ENSMUST00000182954 872 ntBASIC19.41■□□□□ 0.7
Smarcc1P97496 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.41■□□□□ 0.7
Smarcc1P97496 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarcc1P97496 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcc1P97496 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarcc1P97496 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smarcc1P97496 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarcc1P97496 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarcc1P97496 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.4■□□□□ 0.7
Smarcc1P97496 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.4■□□□□ 0.7
Smarcc1P97496 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarcc1P97496 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Smarcc1P97496 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.4■□□□□ 0.7
Smarcc1P97496 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcc1P97496 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcc1P97496 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Smarcc1P97496 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Smarcc1P97496 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcc1P97496 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Gm27437-201ENSMUST00000183429 107 ntBASIC19.39■□□□□ 0.69
Smarcc1P97496 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcc1P97496 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.39■□□□□ 0.69
Smarcc1P97496 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.39■□□□□ 0.69
Smarcc1P97496 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.39■□□□□ 0.69
Smarcc1P97496 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Smarcc1P97496 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smarcc1P97496 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.38■□□□□ 0.69
Smarcc1P97496 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.38■□□□□ 0.69
Smarcc1P97496 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC19.38■□□□□ 0.69
Smarcc1P97496 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.38■□□□□ 0.69
Smarcc1P97496 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarcc1P97496 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarcc1P97496 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.37■□□□□ 0.69
Smarcc1P97496 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms