Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.1□□□□□ -0.31
Npas1P97459 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Npas1P97459 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Npas1P97459 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.09□□□□□ -0.31
Npas1P97459 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Npas1P97459 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.09□□□□□ -0.31
Npas1P97459 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Npas1P97459 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Npas1P97459 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.09□□□□□ -0.31
Npas1P97459 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Npas1P97459 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Npas1P97459 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npas1P97459 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Npas1P97459 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.08□□□□□ -0.32
Npas1P97459 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Npas1P97459 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.08□□□□□ -0.32
Npas1P97459 Gm10653-202ENSMUST00000139570 835 ntBASIC13.08□□□□□ -0.32
Npas1P97459 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.08□□□□□ -0.32
Npas1P97459 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Npas1P97459 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Timm23-208ENSMUST00000226683 750 ntBASIC13.08□□□□□ -0.32
Npas1P97459 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Npas1P97459 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Npas1P97459 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Npas1P97459 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Npas1P97459 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Npas1P97459 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Npas1P97459 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.07□□□□□ -0.32
Npas1P97459 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Npas1P97459 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Npas1P97459 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Npas1P97459 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Npas1P97459 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms