Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cacna1aP97445 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacna1aP97445 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacna1aP97445 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Gm12490-201ENSMUST00000120255 560 ntBASIC14.31□□□□□ -0.12
Cacna1aP97445 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.31□□□□□ -0.12
Cacna1aP97445 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cacna1aP97445 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Gm13223-201ENSMUST00000118609 747 ntBASIC14.31□□□□□ -0.12
Cacna1aP97445 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cacna1aP97445 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1aP97445 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1aP97445 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm22065-201ENSMUST00000103753 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm22066-201ENSMUST00000103761 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24932-201ENSMUST00000103763 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24115-201ENSMUST00000103799 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm22190-201ENSMUST00000103827 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm22191-201ENSMUST00000103831 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24721-201ENSMUST00000103849 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm28018-201ENSMUST00000103869 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm26399-201ENSMUST00000103937 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm25349-201ENSMUST00000177728 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm23616-201ENSMUST00000177797 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm25871-201ENSMUST00000177816 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24752-201ENSMUST00000178240 110 ntBASIC14.3□□□□□ -0.12
Cacna1aP97445 Gm24496-201ENSMUST00000178287 110 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms