Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.92■□□□□ 0.3
Trim43cP86449 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim43cP86449 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43cP86449 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim43cP86449 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim43cP86449 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim43cP86449 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Gm25990-201ENSMUST00000102440 86 ntBASIC16.91■□□□□ 0.3
Trim43cP86449 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trim43cP86449 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Gm6089-201ENSMUST00000197666 938 ntBASIC16.91■□□□□ 0.3
Trim43cP86449 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim43cP86449 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim43cP86449 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim43cP86449 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim43cP86449 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43cP86449 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim43cP86449 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.9■□□□□ 0.3
Trim43cP86449 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim43cP86449 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim43cP86449 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43cP86449 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43cP86449 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43cP86449 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43cP86449 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim43cP86449 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Gm7153-201ENSMUST00000117092 455 ntBASIC16.89■□□□□ 0.29
Trim43cP86449 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim43cP86449 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.89■□□□□ 0.29
Trim43cP86449 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.89■□□□□ 0.29
Trim43cP86449 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim43cP86449 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.89■□□□□ 0.29
Trim43cP86449 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim43cP86449 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim43cP86449 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43cP86449 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim43cP86449 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43cP86449 Gm5682-201ENSMUST00000173402 505 ntBASIC16.88■□□□□ 0.29
Trim43cP86449 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.88■□□□□ 0.29
Trim43cP86449 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43cP86449 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim43cP86449 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms