Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcaP82350 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SgcaP82350 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.06□□□□□ -0.32
SgcaP82350 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
SgcaP82350 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SgcaP82350 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.06□□□□□ -0.32
SgcaP82350 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
SgcaP82350 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.06□□□□□ -0.32
SgcaP82350 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcaP82350 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.05□□□□□ -0.32
SgcaP82350 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SgcaP82350 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.05□□□□□ -0.32
SgcaP82350 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SgcaP82350 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.05□□□□□ -0.32
SgcaP82350 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
SgcaP82350 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SgcaP82350 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SgcaP82350 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcaP82350 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.05□□□□□ -0.32
SgcaP82350 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.05□□□□□ -0.32
SgcaP82350 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SgcaP82350 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Gm5643-201ENSMUST00000117081 966 ntBASIC13.04□□□□□ -0.32
SgcaP82350 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Gm10698-201ENSMUST00000182663 604 ntBASIC13.04□□□□□ -0.32
SgcaP82350 Gm44450-201ENSMUST00000199528 114 ntBASIC13.04□□□□□ -0.32
SgcaP82350 Gm18421-201ENSMUST00000204122 625 ntBASIC13.04□□□□□ -0.32
SgcaP82350 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SgcaP82350 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SgcaP82350 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
SgcaP82350 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms