Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Gm4995-201ENSMUST00000117247 432 ntBASIC16.84■□□□□ 0.29
CiitaP79621 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Gm8318-201ENSMUST00000182954 872 ntBASIC16.84■□□□□ 0.29
CiitaP79621 Gm37935-201ENSMUST00000192012 982 ntBASIC16.84■□□□□ 0.29
CiitaP79621 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.84■□□□□ 0.29
CiitaP79621 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CiitaP79621 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CiitaP79621 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CiitaP79621 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CiitaP79621 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CiitaP79621 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.84■□□□□ 0.29
CiitaP79621 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CiitaP79621 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CiitaP79621 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.83■□□□□ 0.28
CiitaP79621 Gm13597-201ENSMUST00000121239 375 ntBASIC16.83■□□□□ 0.28
CiitaP79621 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.83■□□□□ 0.28
CiitaP79621 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.83■□□□□ 0.28
CiitaP79621 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.83■□□□□ 0.28
CiitaP79621 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.83■□□□□ 0.28
CiitaP79621 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.83■□□□□ 0.28
CiitaP79621 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CiitaP79621 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Gm11594-201ENSMUST00000122313 162 ntBASIC16.82■□□□□ 0.28
CiitaP79621 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 Mir8117-201ENSMUST00000184773 107 ntBASIC16.82■□□□□ 0.28
CiitaP79621 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.82■□□□□ 0.28
CiitaP79621 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.82■□□□□ 0.28
CiitaP79621 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.82■□□□□ 0.28
CiitaP79621 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CiitaP79621 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.82■□□□□ 0.28
CiitaP79621 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.81■□□□□ 0.28
CiitaP79621 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CiitaP79621 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CiitaP79621 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CiitaP79621 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.81■□□□□ 0.28
CiitaP79621 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.81■□□□□ 0.28
CiitaP79621 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CiitaP79621 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.81■□□□□ 0.28
CiitaP79621 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CiitaP79621 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CiitaP79621 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms