Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx1P63006 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Lhx1P63006 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lhx1P63006 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.26■□□□□ 0.03
Lhx1P63006 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.26■□□□□ 0.03
Lhx1P63006 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.26■□□□□ 0.03
Lhx1P63006 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Lhx1P63006 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lhx1P63006 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.26■□□□□ 0.03
Lhx1P63006 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.26■□□□□ 0.03
Lhx1P63006 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lhx1P63006 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.26■□□□□ 0.03
Lhx1P63006 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx1P63006 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Gm9727-201ENSMUST00000161387 555 ntBASIC15.25■□□□□ 0.03
Lhx1P63006 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.25■□□□□ 0.03
Lhx1P63006 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Gm8000-201ENSMUST00000188378 592 ntBASIC15.25■□□□□ 0.03
Lhx1P63006 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.25■□□□□ 0.03
Lhx1P63006 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Lhx1P63006 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lhx1P63006 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lhx1P63006 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Lhx1P63006 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lhx1P63006 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lhx1P63006 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Lhx1P63006 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.24■□□□□ 0.03
Lhx1P63006 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.24■□□□□ 0.03
Lhx1P63006 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.24■□□□□ 0.03
Lhx1P63006 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Gm4899-201ENSMUST00000178708 719 ntBASIC15.24■□□□□ 0.03
Lhx1P63006 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.24■□□□□ 0.03
Lhx1P63006 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.24■□□□□ 0.03
Lhx1P63006 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.24■□□□□ 0.03
Lhx1P63006 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lhx1P63006 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms