Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lmo4P61969 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.54□□□□□ -0.4
Lmo4P61969 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lmo4P61969 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.54□□□□□ -0.4
Lmo4P61969 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Gm14701-201ENSMUST00000117156 348 ntBASIC12.54□□□□□ -0.4
Lmo4P61969 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.54□□□□□ -0.4
Lmo4P61969 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Lmo4P61969 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lmo4P61969 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Gm8396-201ENSMUST00000057361 823 ntBASIC12.54□□□□□ -0.4
Lmo4P61969 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.54□□□□□ -0.4
Lmo4P61969 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lmo4P61969 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lmo4P61969 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lmo4P61969 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.53□□□□□ -0.4
Lmo4P61969 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.53□□□□□ -0.4
Lmo4P61969 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Lmo4P61969 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lmo4P61969 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lmo4P61969 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.53□□□□□ -0.4
Lmo4P61969 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.53□□□□□ -0.4
Lmo4P61969 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.53□□□□□ -0.4
Lmo4P61969 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.53□□□□□ -0.4
Lmo4P61969 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.53□□□□□ -0.4
Lmo4P61969 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lmo4P61969 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lmo4P61969 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lmo4P61969 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lmo4P61969 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lmo4P61969 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lmo4P61969 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.52□□□□□ -0.41
Lmo4P61969 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.52□□□□□ -0.41
Lmo4P61969 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Gm2272-201ENSMUST00000194903 582 ntBASIC12.52□□□□□ -0.41
Lmo4P61969 Gm20553-201ENSMUST00000204205 844 ntBASIC12.52□□□□□ -0.41
Lmo4P61969 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lmo4P61969 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lmo4P61969 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lmo4P61969 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.52□□□□□ -0.41
Lmo4P61969 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.52□□□□□ -0.41
Lmo4P61969 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lmo4P61969 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.51□□□□□ -0.41
Lmo4P61969 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.51□□□□□ -0.41
Lmo4P61969 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.51□□□□□ -0.41
Lmo4P61969 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.51□□□□□ -0.41
Lmo4P61969 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.51□□□□□ -0.41
Lmo4P61969 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lmo4P61969 Gm9385-201ENSMUST00000117563 472 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms