Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.43□□□□□ -0.58
CirbpP60824 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CirbpP60824 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CirbpP60824 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
CirbpP60824 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
CirbpP60824 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CirbpP60824 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CirbpP60824 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CirbpP60824 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CirbpP60824 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CirbpP60824 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Gm7153-201ENSMUST00000117092 455 ntBASIC11.42□□□□□ -0.58
CirbpP60824 Gm12895-201ENSMUST00000122214 226 ntBASIC11.42□□□□□ -0.58
CirbpP60824 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CirbpP60824 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.42□□□□□ -0.58
CirbpP60824 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Gm34391-201ENSMUST00000203706 907 ntBASIC11.42□□□□□ -0.58
CirbpP60824 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.42□□□□□ -0.58
CirbpP60824 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.42□□□□□ -0.58
CirbpP60824 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CirbpP60824 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CirbpP60824 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Rprl3-201ENSMUST00000157400 290 ntBASIC11.41□□□□□ -0.58
CirbpP60824 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.41□□□□□ -0.58
CirbpP60824 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Birc2-201ENSMUST00000054878 378 ntBASIC11.41□□□□□ -0.58
CirbpP60824 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.41□□□□□ -0.58
CirbpP60824 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.41□□□□□ -0.58
CirbpP60824 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CirbpP60824 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CirbpP60824 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CirbpP60824 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.4□□□□□ -0.58
CirbpP60824 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CirbpP60824 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CirbpP60824 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CirbpP60824 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CirbpP60824 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CirbpP60824 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CirbpP60824 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CirbpP60824 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms