Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sf3b6P59708 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sf3b6P59708 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3b6P59708 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3b6P59708 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.83□□□□□ -0.19
Sf3b6P59708 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3b6P59708 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sf3b6P59708 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.83□□□□□ -0.2
Sf3b6P59708 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.83□□□□□ -0.2
Sf3b6P59708 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sf3b6P59708 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sf3b6P59708 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Sf3b6P59708 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sf3b6P59708 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sf3b6P59708 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.82□□□□□ -0.2
Sf3b6P59708 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sf3b6P59708 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.82□□□□□ -0.2
Sf3b6P59708 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.82□□□□□ -0.2
Sf3b6P59708 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Sf3b6P59708 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sf3b6P59708 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sf3b6P59708 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sf3b6P59708 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm18101-201ENSMUST00000215769 548 ntBASIC13.81□□□□□ -0.2
Sf3b6P59708 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.81□□□□□ -0.2
Sf3b6P59708 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm7367-201ENSMUST00000057611 492 ntBASIC13.81□□□□□ -0.2
Sf3b6P59708 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sf3b6P59708 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.81□□□□□ -0.2
Sf3b6P59708 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Sf3b6P59708 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.81□□□□□ -0.2
Sf3b6P59708 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sf3b6P59708 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sf3b6P59708 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sf3b6P59708 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms