Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Tpm1P58771 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.4■□□□□ 0.38
Tpm1P58771 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Gm10566-201ENSMUST00000086739 996 ntBASIC17.4■□□□□ 0.38
Tpm1P58771 Gm10812-201ENSMUST00000099864 546 ntBASIC17.4■□□□□ 0.38
Tpm1P58771 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tpm1P58771 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tpm1P58771 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tpm1P58771 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tpm1P58771 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tpm1P58771 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Gm30025-201ENSMUST00000218555 728 ntBASIC17.39■□□□□ 0.37
Tpm1P58771 Gm5417-201ENSMUST00000079706 384 ntBASIC17.39■□□□□ 0.37
Tpm1P58771 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Tpm1P58771 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tpm1P58771 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tpm1P58771 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.38■□□□□ 0.37
Tpm1P58771 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tpm1P58771 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Gm26039-201ENSMUST00000158152 144 ntBASIC17.38■□□□□ 0.37
Tpm1P58771 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tpm1P58771 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tpm1P58771 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.38■□□□□ 0.37
Tpm1P58771 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tpm1P58771 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tpm1P58771 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.37■□□□□ 0.37
Tpm1P58771 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.37■□□□□ 0.37
Tpm1P58771 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tpm1P58771 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tpm1P58771 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Tpm1P58771 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.36■□□□□ 0.37
Tpm1P58771 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.36■□□□□ 0.37
Tpm1P58771 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.36■□□□□ 0.37
Tpm1P58771 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tpm1P58771 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms