Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdh11P55288 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Cdh11P55288 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cdh11P55288 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh11P55288 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh11P55288 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Cdh11P55288 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh11P55288 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh11P55288 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh11P55288 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh11P55288 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cdh11P55288 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh11P55288 Gm7153-201ENSMUST00000117092 455 ntBASIC14.2□□□□□ -0.14
Cdh11P55288 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh11P55288 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.2□□□□□ -0.14
Cdh11P55288 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh11P55288 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh11P55288 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh11P55288 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh11P55288 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.19□□□□□ -0.14
Cdh11P55288 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdh11P55288 Olfr129-201ENSMUST00000122318 993 ntBASIC14.19□□□□□ -0.14
Cdh11P55288 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.19□□□□□ -0.14
Cdh11P55288 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cdh11P55288 Gm36967-201ENSMUST00000193814 266 ntBASIC14.19□□□□□ -0.14
Cdh11P55288 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.19□□□□□ -0.14
Cdh11P55288 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh11P55288 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh11P55288 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh11P55288 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh11P55288 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh11P55288 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Gm15794-201ENSMUST00000120182 631 ntBASIC14.18□□□□□ -0.14
Cdh11P55288 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdh11P55288 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cdh11P55288 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh11P55288 Gm18421-201ENSMUST00000204122 625 ntBASIC14.18□□□□□ -0.14
Cdh11P55288 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.18□□□□□ -0.14
Cdh11P55288 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh11P55288 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms