Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Msh6P54276 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Msh6P54276 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.63■□□□□ 0.73
Msh6P54276 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.63■□□□□ 0.73
Msh6P54276 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Msh6P54276 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.62■□□□□ 0.73
Msh6P54276 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Msh6P54276 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Msh6P54276 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.62■□□□□ 0.73
Msh6P54276 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh6P54276 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.62■□□□□ 0.73
Msh6P54276 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.62■□□□□ 0.73
Msh6P54276 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.62■□□□□ 0.73
Msh6P54276 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.62■□□□□ 0.73
Msh6P54276 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Gm22065-201ENSMUST00000103753 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm22066-201ENSMUST00000103761 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24932-201ENSMUST00000103763 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24115-201ENSMUST00000103799 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm22190-201ENSMUST00000103827 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm22191-201ENSMUST00000103831 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24721-201ENSMUST00000103849 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm28018-201ENSMUST00000103869 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm26399-201ENSMUST00000103937 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Mir449b-201ENSMUST00000104833 80 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh6P54276 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.61■□□□□ 0.73
Msh6P54276 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.61■□□□□ 0.73
Msh6P54276 Gm25349-201ENSMUST00000177728 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm23616-201ENSMUST00000177797 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm25871-201ENSMUST00000177816 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24752-201ENSMUST00000178240 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24496-201ENSMUST00000178287 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm25649-201ENSMUST00000178476 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm25548-201ENSMUST00000178681 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm23147-201ENSMUST00000178841 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm26095-201ENSMUST00000179270 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm22171-201ENSMUST00000179283 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm23936-201ENSMUST00000179354 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm22619-201ENSMUST00000179516 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm25255-201ENSMUST00000179579 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24755-201ENSMUST00000179691 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm26506-201ENSMUST00000179692 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm25086-201ENSMUST00000179931 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm23243-201ENSMUST00000180047 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24659-201ENSMUST00000180212 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm24169-201ENSMUST00000180244 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm23689-201ENSMUST00000180354 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Gm27359-201ENSMUST00000184153 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm27785-201ENSMUST00000184268 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm27466-201ENSMUST00000184396 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm27703-201ENSMUST00000184836 110 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.61■□□□□ 0.73
Msh6P54276 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.61■□□□□ 0.73
Msh6P54276 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh6P54276 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.61■□□□□ 0.73
Msh6P54276 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Msh6P54276 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh6P54276 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Msh6P54276 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.6■□□□□ 0.73
Msh6P54276 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Msh6P54276 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Msh6P54276 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Msh6P54276 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Msh6P54276 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.6■□□□□ 0.73
Msh6P54276 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Msh6P54276 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Msh6P54276 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.6■□□□□ 0.73
Msh6P54276 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms