Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.84■□□□□ 0.13
Sox1P53783 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.84■□□□□ 0.13
Sox1P53783 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.84■□□□□ 0.13
Sox1P53783 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Sox1P53783 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sox1P53783 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.83■□□□□ 0.13
Sox1P53783 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox1P53783 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox1P53783 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox1P53783 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sox1P53783 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.83■□□□□ 0.12
Sox1P53783 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.83■□□□□ 0.12
Sox1P53783 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sox1P53783 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Sox1P53783 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.83■□□□□ 0.12
Sox1P53783 Gm18018-201ENSMUST00000198273 408 ntBASIC15.83■□□□□ 0.12
Sox1P53783 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.83■□□□□ 0.12
Sox1P53783 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Gm44487-201ENSMUST00000205145 325 ntBASIC15.83■□□□□ 0.12
Sox1P53783 Gm19164-201ENSMUST00000210667 640 ntBASIC15.83■□□□□ 0.12
Sox1P53783 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sox1P53783 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Sox1P53783 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Sox1P53783 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.83■□□□□ 0.12
Sox1P53783 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sox1P53783 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox1P53783 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.82■□□□□ 0.12
Sox1P53783 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.82■□□□□ 0.12
Sox1P53783 Gm27680-201ENSMUST00000184192 160 ntBASIC15.82■□□□□ 0.12
Sox1P53783 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.82■□□□□ 0.12
Sox1P53783 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.82■□□□□ 0.12
Sox1P53783 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox1P53783 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox1P53783 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Gm13015-201ENSMUST00000118674 204 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Mir3547-201ENSMUST00000175461 88 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Gm29667-201ENSMUST00000190817 490 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox1P53783 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Sox1P53783 Gm44344-201ENSMUST00000200287 129 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.81■□□□□ 0.12
Sox1P53783 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.81■□□□□ 0.12
Sox1P53783 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.81■□□□□ 0.12
Sox1P53783 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox1P53783 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sox1P53783 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox1P53783 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms