Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox2P48432 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.62□□□□□ -0.07
Sox2P48432 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sox2P48432 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sox2P48432 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox2P48432 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox2P48432 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sox2P48432 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Sox2P48432 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.61□□□□□ -0.07
Sox2P48432 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Gm10052-201ENSMUST00000168019 960 ntBASIC14.61□□□□□ -0.07
Sox2P48432 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Gm7729-201ENSMUST00000050143 801 ntBASIC14.61□□□□□ -0.07
Sox2P48432 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.61□□□□□ -0.07
Sox2P48432 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox2P48432 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.61□□□□□ -0.07
Sox2P48432 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sox2P48432 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sox2P48432 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sox2P48432 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sox2P48432 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox2P48432 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox2P48432 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sox2P48432 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.6□□□□□ -0.07
Sox2P48432 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Sox2P48432 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.6□□□□□ -0.07
Sox2P48432 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.6□□□□□ -0.07
Sox2P48432 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sox2P48432 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sox2P48432 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox2P48432 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sox2P48432 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox2P48432 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox2P48432 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Mir5130-201ENSMUST00000175160 84 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Gm22240-201ENSMUST00000175225 82 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.59□□□□□ -0.07
Sox2P48432 Gm27011-201ENSMUST00000182352 972 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Gm44430-201ENSMUST00000203376 995 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.59□□□□□ -0.07
Sox2P48432 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.59□□□□□ -0.07
Sox2P48432 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Sox2P48432 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sox2P48432 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms