Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm8825-201ENSMUST00000182565 998 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm4518-201ENSMUST00000182638 718 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rfx2P48379 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm15590-201ENSMUST00000078419 552 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.3■□□□□ 0.2
Rfx2P48379 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
Rfx2P48379 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx2P48379 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx2P48379 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx2P48379 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx2P48379 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.29■□□□□ 0.2
Rfx2P48379 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx2P48379 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.29■□□□□ 0.2
Rfx2P48379 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.29■□□□□ 0.2
Rfx2P48379 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx2P48379 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rfx2P48379 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Rfx2P48379 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx2P48379 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.28■□□□□ 0.2
Rfx2P48379 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.28■□□□□ 0.2
Rfx2P48379 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.28■□□□□ 0.2
Rfx2P48379 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx2P48379 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx2P48379 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx2P48379 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rfx2P48379 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms