Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gdf6P43028 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Gdf6P43028 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.33■□□□□ 0.21
Gdf6P43028 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gdf6P43028 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Gdf6P43028 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Gm14722-201ENSMUST00000118943 689 ntBASIC16.33■□□□□ 0.2
Gdf6P43028 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.33■□□□□ 0.2
Gdf6P43028 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.33■□□□□ 0.2
Gdf6P43028 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Gm18246-201ENSMUST00000221023 728 ntBASIC16.33■□□□□ 0.2
Gdf6P43028 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.33■□□□□ 0.2
Gdf6P43028 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Gdf6P43028 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Gdf6P43028 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.33■□□□□ 0.2
Gdf6P43028 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gdf6P43028 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.33■□□□□ 0.2
Gdf6P43028 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gdf6P43028 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.32■□□□□ 0.2
Gdf6P43028 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.32■□□□□ 0.2
Gdf6P43028 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gdf6P43028 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gdf6P43028 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Gdf6P43028 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Gdf6P43028 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.31■□□□□ 0.2
Gdf6P43028 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.31■□□□□ 0.2
Gdf6P43028 Gm17271-201ENSMUST00000165535 355 ntBASIC16.31■□□□□ 0.2
Gdf6P43028 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.31■□□□□ 0.2
Gdf6P43028 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.31■□□□□ 0.2
Gdf6P43028 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.31■□□□□ 0.2
Gdf6P43028 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gdf6P43028 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Gdf6P43028 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.3■□□□□ 0.2
Gdf6P43028 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gdf6P43028 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Gdf6P43028 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gdf6P43028 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Gdf6P43028 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.3■□□□□ 0.2
Gdf6P43028 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gdf6P43028 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gdf6P43028 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gdf6P43028 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gdf6P43028 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gdf6P43028 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gdf6P43028 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms