Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc5P32043 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc5P32043 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc5P32043 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc5P32043 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Hoxc5P32043 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc5P32043 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc5P32043 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc5P32043 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxc5P32043 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.45□□□□□ -0.1
Hoxc5P32043 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.45□□□□□ -0.1
Hoxc5P32043 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxc5P32043 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Hoxc5P32043 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc5P32043 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc5P32043 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc5P32043 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.44□□□□□ -0.1
Hoxc5P32043 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc5P32043 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hoxc5P32043 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxc5P32043 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.44□□□□□ -0.1
Hoxc5P32043 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxc5P32043 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxc5P32043 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxc5P32043 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxc5P32043 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.43□□□□□ -0.1
Hoxc5P32043 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxc5P32043 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Hoxc5P32043 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxc5P32043 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.42□□□□□ -0.1
Hoxc5P32043 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc5P32043 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxc5P32043 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxc5P32043 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxc5P32043 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxc5P32043 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms