Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.82■□□□□ 0.44
Vcam1P29533 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vcam1P29533 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.81■□□□□ 0.44
Vcam1P29533 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.81■□□□□ 0.44
Vcam1P29533 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Gm18889-201ENSMUST00000174284 929 ntBASIC17.81■□□□□ 0.44
Vcam1P29533 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.81■□□□□ 0.44
Vcam1P29533 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Gm5312-201ENSMUST00000203728 547 ntBASIC17.81■□□□□ 0.44
Vcam1P29533 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.81■□□□□ 0.44
Vcam1P29533 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.81■□□□□ 0.44
Vcam1P29533 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vcam1P29533 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vcam1P29533 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vcam1P29533 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.8■□□□□ 0.44
Vcam1P29533 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Gm13616-201ENSMUST00000120600 222 ntBASIC17.8■□□□□ 0.44
Vcam1P29533 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Rprl2-201ENSMUST00000157150 290 ntBASIC17.8■□□□□ 0.44
Vcam1P29533 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vcam1P29533 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.8■□□□□ 0.44
Vcam1P29533 Gm10576-201ENSMUST00000191927 825 ntBASIC17.8■□□□□ 0.44
Vcam1P29533 Gm43474-201ENSMUST00000196415 774 ntBASIC17.8■□□□□ 0.44
Vcam1P29533 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.8■□□□□ 0.44
Vcam1P29533 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.8■□□□□ 0.44
Vcam1P29533 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Vcam1P29533 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vcam1P29533 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vcam1P29533 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Vcam1P29533 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vcam1P29533 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.79■□□□□ 0.44
Vcam1P29533 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vcam1P29533 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vcam1P29533 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.79■□□□□ 0.44
Vcam1P29533 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.79■□□□□ 0.44
Vcam1P29533 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vcam1P29533 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.79■□□□□ 0.44
Vcam1P29533 Gm10154-201ENSMUST00000084445 354 ntBASIC17.79■□□□□ 0.44
Vcam1P29533 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.79■□□□□ 0.44
Vcam1P29533 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Vcam1P29533 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.79■□□□□ 0.44
Vcam1P29533 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vcam1P29533 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vcam1P29533 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Vcam1P29533 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vcam1P29533 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms