Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.62■□□□□ 0.25
Mmp3P28862 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Mmp3P28862 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.62■□□□□ 0.25
Mmp3P28862 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mmp3P28862 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp3P28862 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp3P28862 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp3P28862 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp3P28862 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Mmp3P28862 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Mmp3P28862 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Mmp3P28862 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.61■□□□□ 0.25
Mmp3P28862 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp3P28862 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp3P28862 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp3P28862 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.61■□□□□ 0.25
Mmp3P28862 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.6■□□□□ 0.25
Mmp3P28862 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Gm15427-201ENSMUST00000117288 531 ntBASIC16.6■□□□□ 0.25
Mmp3P28862 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.6■□□□□ 0.25
Mmp3P28862 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.6■□□□□ 0.25
Mmp3P28862 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Gm10499-201ENSMUST00000174094 934 ntBASIC16.6■□□□□ 0.25
Mmp3P28862 Thap2-203ENSMUST00000218989 527 ntBASIC16.6■□□□□ 0.25
Mmp3P28862 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Mmp3P28862 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Mmp3P28862 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.6■□□□□ 0.25
Mmp3P28862 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Mmp3P28862 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.6■□□□□ 0.25
Mmp3P28862 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp3P28862 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.59■□□□□ 0.25
Mmp3P28862 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mmp3P28862 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Gm27301-201ENSMUST00000184012 127 ntBASIC16.59■□□□□ 0.25
Mmp3P28862 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.59■□□□□ 0.25
Mmp3P28862 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp3P28862 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Mmp3P28862 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.58■□□□□ 0.25
Mmp3P28862 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.58■□□□□ 0.25
Mmp3P28862 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.58■□□□□ 0.25
Mmp3P28862 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp3P28862 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp3P28862 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.58■□□□□ 0.24
Mmp3P28862 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.58■□□□□ 0.24
Mmp3P28862 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.58■□□□□ 0.24
Mmp3P28862 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.58■□□□□ 0.24
Mmp3P28862 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp3P28862 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms