Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn1P18608 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn1P18608 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmgn1P18608 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Gm22240-201ENSMUST00000175225 82 ntBASIC14.25□□□□□ -0.13
Hmgn1P18608 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn1P18608 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hmgn1P18608 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Hmgn1P18608 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.24□□□□□ -0.13
Hmgn1P18608 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Gm11355-201ENSMUST00000121120 306 ntBASIC14.24□□□□□ -0.13
Hmgn1P18608 Gm37055-201ENSMUST00000191866 133 ntBASIC14.24□□□□□ -0.13
Hmgn1P18608 Gm18959-201ENSMUST00000208954 655 ntBASIC14.24□□□□□ -0.13
Hmgn1P18608 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.24□□□□□ -0.13
Hmgn1P18608 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hmgn1P18608 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hmgn1P18608 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.24□□□□□ -0.13
Hmgn1P18608 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hmgn1P18608 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.23□□□□□ -0.13
Hmgn1P18608 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.23□□□□□ -0.13
Hmgn1P18608 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.23□□□□□ -0.13
Hmgn1P18608 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.23□□□□□ -0.13
Hmgn1P18608 Gm21559-201ENSMUST00000220638 855 ntBASIC14.23□□□□□ -0.13
Hmgn1P18608 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Hmgn1P18608 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Gm8587-201ENSMUST00000076538 843 ntBASIC14.23□□□□□ -0.13
Hmgn1P18608 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.23□□□□□ -0.13
Hmgn1P18608 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Hmgn1P18608 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hmgn1P18608 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hmgn1P18608 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Hmgn1P18608 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgn1P18608 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms