Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.62■□□□□ 0.41
Kcna1P16388 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.62■□□□□ 0.41
Kcna1P16388 Gm43514-201ENSMUST00000198852 424 ntBASIC17.62■□□□□ 0.41
Kcna1P16388 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.62■□□□□ 0.41
Kcna1P16388 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Kcna1P16388 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.61■□□□□ 0.41
Kcna1P16388 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.61■□□□□ 0.41
Kcna1P16388 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Kcna1P16388 Gm18489-201ENSMUST00000172565 551 ntBASIC17.61■□□□□ 0.41
Kcna1P16388 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Kcna1P16388 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Kcna1P16388 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Kcna1P16388 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.6■□□□□ 0.41
Kcna1P16388 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.6■□□□□ 0.41
Kcna1P16388 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.6■□□□□ 0.41
Kcna1P16388 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Kcna1P16388 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.6■□□□□ 0.41
Kcna1P16388 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Kcna1P16388 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.6■□□□□ 0.41
Kcna1P16388 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Kcna1P16388 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Kcna1P16388 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.59■□□□□ 0.41
Kcna1P16388 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Kcna1P16388 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 Gm14722-201ENSMUST00000118943 689 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 Gm14140-201ENSMUST00000119999 995 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.59■□□□□ 0.41
Kcna1P16388 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.59■□□□□ 0.41
Kcna1P16388 Gm8318-201ENSMUST00000182954 872 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 Gm27300-201ENSMUST00000184085 97 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 Gm27335-201ENSMUST00000184758 97 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.59■□□□□ 0.41
Kcna1P16388 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Kcna1P16388 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.59■□□□□ 0.41
Kcna1P16388 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms