Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.92□□□□□ -0.02
Cntn1P12960 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cntn1P12960 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.91□□□□□ -0.02
Cntn1P12960 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cntn1P12960 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.91□□□□□ -0.02
Cntn1P12960 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cntn1P12960 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.91□□□□□ -0.02
Cntn1P12960 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.91□□□□□ -0.02
Cntn1P12960 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.91□□□□□ -0.02
Cntn1P12960 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.91□□□□□ -0.02
Cntn1P12960 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Cntn1P12960 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.91□□□□□ -0.02
Cntn1P12960 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cntn1P12960 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cntn1P12960 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.9□□□□□ -0.02
Cntn1P12960 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cntn1P12960 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.9□□□□□ -0.02
Cntn1P12960 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.9□□□□□ -0.02
Cntn1P12960 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.9□□□□□ -0.02
Cntn1P12960 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.9□□□□□ -0.02
Cntn1P12960 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.9□□□□□ -0.02
Cntn1P12960 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.9□□□□□ -0.02
Cntn1P12960 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cntn1P12960 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Cntn1P12960 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cntn1P12960 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cntn1P12960 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cntn1P12960 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cntn1P12960 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cntn1P12960 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.88□□□□□ -0.03
Cntn1P12960 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cntn1P12960 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cntn1P12960 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms