Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccl3P10855 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccl3P10855 Gm2272-201ENSMUST00000194903 582 ntBASIC13.7□□□□□ -0.22
Ccl3P10855 Gm18057-201ENSMUST00000208220 503 ntBASIC13.7□□□□□ -0.22
Ccl3P10855 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccl3P10855 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.7□□□□□ -0.22
Ccl3P10855 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.7□□□□□ -0.22
Ccl3P10855 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccl3P10855 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccl3P10855 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.7□□□□□ -0.22
Ccl3P10855 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccl3P10855 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.7□□□□□ -0.22
Ccl3P10855 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccl3P10855 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl3P10855 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccl3P10855 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.69□□□□□ -0.22
Ccl3P10855 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccl3P10855 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ccl3P10855 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccl3P10855 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Gm14722-201ENSMUST00000118943 689 ntBASIC13.69□□□□□ -0.22
Ccl3P10855 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.69□□□□□ -0.22
Ccl3P10855 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccl3P10855 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccl3P10855 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccl3P10855 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccl3P10855 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.69□□□□□ -0.22
Ccl3P10855 Gm10154-201ENSMUST00000084445 354 ntBASIC13.69□□□□□ -0.22
Ccl3P10855 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ccl3P10855 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Ccl3P10855 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccl3P10855 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccl3P10855 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccl3P10855 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccl3P10855 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.68□□□□□ -0.22
Ccl3P10855 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ccl3P10855 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccl3P10855 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccl3P10855 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.68□□□□□ -0.22
Ccl3P10855 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccl3P10855 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.68□□□□□ -0.22
Ccl3P10855 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccl3P10855 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm22065-201ENSMUST00000103753 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm22066-201ENSMUST00000103761 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24932-201ENSMUST00000103763 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24115-201ENSMUST00000103799 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm22190-201ENSMUST00000103827 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm22191-201ENSMUST00000103831 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm24721-201ENSMUST00000103849 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm28018-201ENSMUST00000103869 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Gm26399-201ENSMUST00000103937 110 ntBASIC13.67□□□□□ -0.22
Ccl3P10855 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccl3P10855 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccl3P10855 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ccl3P10855 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms