Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm7791-201ENSMUST00000219066 539 ntBASIC12.12□□□□□ -0.47
Ccl1P10146 Gm18115-201ENSMUST00000221209 621 ntBASIC12.12□□□□□ -0.47
Ccl1P10146 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccl1P10146 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ccl1P10146 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.12□□□□□ -0.47
Ccl1P10146 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccl1P10146 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.12□□□□□ -0.47
Ccl1P10146 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl1P10146 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccl1P10146 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl1P10146 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccl1P10146 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ccl1P10146 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccl1P10146 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.11□□□□□ -0.47
Ccl1P10146 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl1P10146 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccl1P10146 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccl1P10146 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccl1P10146 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccl1P10146 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccl1P10146 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.1□□□□□ -0.47
Ccl1P10146 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccl1P10146 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccl1P10146 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccl1P10146 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccl1P10146 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms