Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.74□□□□□ -0.05
ApoeP08226 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.74□□□□□ -0.05
ApoeP08226 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.74□□□□□ -0.05
ApoeP08226 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.74□□□□□ -0.05
ApoeP08226 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ApoeP08226 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ApoeP08226 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.74□□□□□ -0.05
ApoeP08226 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ApoeP08226 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
ApoeP08226 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ApoeP08226 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ApoeP08226 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
ApoeP08226 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ApoeP08226 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.73□□□□□ -0.05
ApoeP08226 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ApoeP08226 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Gm8520-201ENSMUST00000186517 868 ntBASIC14.73□□□□□ -0.05
ApoeP08226 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.73□□□□□ -0.05
ApoeP08226 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.73□□□□□ -0.05
ApoeP08226 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
ApoeP08226 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.73□□□□□ -0.05
ApoeP08226 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ApoeP08226 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.72□□□□□ -0.05
ApoeP08226 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
ApoeP08226 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.72□□□□□ -0.05
ApoeP08226 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ApoeP08226 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.72□□□□□ -0.05
ApoeP08226 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.71□□□□□ -0.05
ApoeP08226 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms