Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Col4a2P08122 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.36□□□□□ -0.11
Col4a2P08122 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a2P08122 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a2P08122 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a2P08122 Gm14722-201ENSMUST00000118943 689 ntBASIC14.35□□□□□ -0.11
Col4a2P08122 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col4a2P08122 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.35□□□□□ -0.11
Col4a2P08122 Gm2272-201ENSMUST00000194903 582 ntBASIC14.35□□□□□ -0.11
Col4a2P08122 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col4a2P08122 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Col4a2P08122 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col4a2P08122 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col4a2P08122 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.35□□□□□ -0.11
Col4a2P08122 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col4a2P08122 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.35□□□□□ -0.11
Col4a2P08122 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col4a2P08122 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.34□□□□□ -0.11
Col4a2P08122 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Col4a2P08122 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col4a2P08122 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col4a2P08122 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Col4a2P08122 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Gm11424-201ENSMUST00000121929 829 ntBASIC14.34□□□□□ -0.11
Col4a2P08122 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.34□□□□□ -0.11
Col4a2P08122 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a2P08122 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.34□□□□□ -0.11
Col4a2P08122 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.34□□□□□ -0.11
Col4a2P08122 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.34□□□□□ -0.11
Col4a2P08122 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col4a2P08122 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a2P08122 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a2P08122 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a2P08122 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.33□□□□□ -0.12
Col4a2P08122 Gm24158-201ENSMUST00000175263 71 ntBASIC14.33□□□□□ -0.12
Col4a2P08122 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.33□□□□□ -0.12
Col4a2P08122 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col4a2P08122 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a2P08122 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.33□□□□□ -0.12
Col4a2P08122 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a2P08122 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col4a2P08122 Gm6973-201ENSMUST00000117080 721 ntBASIC14.32□□□□□ -0.12
Col4a2P08122 Gm2810-201ENSMUST00000118681 990 ntBASIC14.32□□□□□ -0.12
Col4a2P08122 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Col4a2P08122 Gm5866-201ENSMUST00000177881 973 ntBASIC14.32□□□□□ -0.12
Col4a2P08122 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.32□□□□□ -0.12
Col4a2P08122 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Gm10499-201ENSMUST00000174094 934 ntBASIC14.32□□□□□ -0.12
Col4a2P08122 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a2P08122 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms