Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.77□□□□□ -0.04
Krt1P04104 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.77□□□□□ -0.04
Krt1P04104 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Krt1P04104 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Krt1P04104 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Krt1P04104 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.77□□□□□ -0.04
Krt1P04104 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Krt1P04104 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Krt1P04104 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Krt1P04104 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Krt1P04104 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.77□□□□□ -0.05
Krt1P04104 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Krt1P04104 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Krt1P04104 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.76□□□□□ -0.05
Krt1P04104 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Krt1P04104 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.76□□□□□ -0.05
Krt1P04104 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Krt1P04104 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.76□□□□□ -0.05
Krt1P04104 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.76□□□□□ -0.05
Krt1P04104 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.76□□□□□ -0.05
Krt1P04104 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.76□□□□□ -0.05
Krt1P04104 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Krt1P04104 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Krt1P04104 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Krt1P04104 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.76□□□□□ -0.05
Krt1P04104 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Krt1P04104 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Krt1P04104 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.75□□□□□ -0.05
Krt1P04104 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Krt1P04104 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.75□□□□□ -0.05
Krt1P04104 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Gm18284-201ENSMUST00000172604 624 ntBASIC14.75□□□□□ -0.05
Krt1P04104 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.75□□□□□ -0.05
Krt1P04104 Gm44450-201ENSMUST00000199528 114 ntBASIC14.75□□□□□ -0.05
Krt1P04104 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Krt1P04104 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.75□□□□□ -0.05
Krt1P04104 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Krt1P04104 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Krt1P04104 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.74□□□□□ -0.05
Krt1P04104 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Krt1P04104 Gm12933-201ENSMUST00000120203 872 ntBASIC14.74□□□□□ -0.05
Krt1P04104 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.74□□□□□ -0.05
Krt1P04104 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Krt1P04104 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms