Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Col4a1P02463 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.96■□□□□ 0.63
Col4a1P02463 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col4a1P02463 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col4a1P02463 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
Col4a1P02463 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.95■□□□□ 0.62
Col4a1P02463 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.95■□□□□ 0.62
Col4a1P02463 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.95■□□□□ 0.62
Col4a1P02463 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col4a1P02463 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.95■□□□□ 0.62
Col4a1P02463 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Col4a1P02463 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Col4a1P02463 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Col4a1P02463 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col4a1P02463 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.95■□□□□ 0.62
Col4a1P02463 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col4a1P02463 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.95■□□□□ 0.62
Col4a1P02463 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 App-207ENSMUST00000227737 2827 ntBASIC18.94■□□□□ 0.62
Col4a1P02463 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Col4a1P02463 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Gm6415-201ENSMUST00000118488 348 ntBASIC18.94■□□□□ 0.62
Col4a1P02463 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.94■□□□□ 0.62
Col4a1P02463 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
Col4a1P02463 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.94■□□□□ 0.62
Col4a1P02463 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.94■□□□□ 0.62
Col4a1P02463 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col4a1P02463 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Col4a1P02463 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col4a1P02463 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col4a1P02463 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Gm24158-201ENSMUST00000175263 71 ntBASIC18.93■□□□□ 0.62
Col4a1P02463 Gm27920-201ENSMUST00000183953 96 ntBASIC18.93■□□□□ 0.62
Col4a1P02463 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.93■□□□□ 0.62
Col4a1P02463 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col4a1P02463 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col4a1P02463 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Col4a1P02463 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.92■□□□□ 0.62
Col4a1P02463 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col4a1P02463 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.92■□□□□ 0.62
Col4a1P02463 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.92■□□□□ 0.62
Col4a1P02463 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.92■□□□□ 0.62
Col4a1P02463 Gm2423-201ENSMUST00000074863 733 ntBASIC18.92■□□□□ 0.62
Col4a1P02463 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.92■□□□□ 0.62
Col4a1P02463 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col4a1P02463 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.92■□□□□ 0.62
Col4a1P02463 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col4a1P02463 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms