Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01852 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P01852 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
P01852 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.24□□□□□ -0.13
P01852 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P01852 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
P01852 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P01852 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P01852 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P01852 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P01852 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
P01852 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.23□□□□□ -0.13
P01852 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.23□□□□□ -0.13
P01852 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.23□□□□□ -0.13
P01852 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P01852 Gm18195-201ENSMUST00000207604 706 ntBASIC14.23□□□□□ -0.13
P01852 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.23□□□□□ -0.13
P01852 Gm18622-201ENSMUST00000219361 595 ntBASIC14.23□□□□□ -0.13
P01852 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.23□□□□□ -0.13
P01852 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.23□□□□□ -0.13
P01852 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P01852 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
P01852 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01852 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P01852 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.22□□□□□ -0.13
P01852 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P01852 Gm7862-201ENSMUST00000121461 292 ntBASIC14.22□□□□□ -0.13
P01852 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P01852 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
P01852 Mzt1-203ENSMUST00000227948 952 ntBASIC14.22□□□□□ -0.13
P01852 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.22□□□□□ -0.13
P01852 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.22□□□□□ -0.13
P01852 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.22□□□□□ -0.13
P01852 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
P01852 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.22□□□□□ -0.13
P01852 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.22□□□□□ -0.13
P01852 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P01852 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.21□□□□□ -0.13
P01852 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
P01852 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.21□□□□□ -0.13
P01852 Gm25990-201ENSMUST00000102440 86 ntBASIC14.21□□□□□ -0.13
P01852 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Gm13418-201ENSMUST00000119097 944 ntBASIC14.21□□□□□ -0.13
P01852 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.21□□□□□ -0.13
P01852 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P01852 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms