Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ifna1P01572 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.16□□□□□ -0.3
Ifna1P01572 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ifna1P01572 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ifna1P01572 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.15□□□□□ -0.3
Ifna1P01572 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ifna1P01572 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.15□□□□□ -0.3
Ifna1P01572 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.15□□□□□ -0.3
Ifna1P01572 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ifna1P01572 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ifna1P01572 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ifna1P01572 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.31
Ifna1P01572 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ifna1P01572 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ifna1P01572 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ifna1P01572 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.14□□□□□ -0.31
Ifna1P01572 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Ifna1P01572 Gm10052-201ENSMUST00000168019 960 ntBASIC13.14□□□□□ -0.31
Ifna1P01572 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.14□□□□□ -0.31
Ifna1P01572 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Gm7729-201ENSMUST00000050143 801 ntBASIC13.14□□□□□ -0.31
Ifna1P01572 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.14□□□□□ -0.31
Ifna1P01572 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ifna1P01572 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ifna1P01572 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ifna1P01572 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ifna1P01572 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ifna1P01572 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ifna1P01572 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.13□□□□□ -0.31
Ifna1P01572 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.13□□□□□ -0.31
Ifna1P01572 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ifna1P01572 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.13□□□□□ -0.31
Ifna1P01572 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ifna1P01572 Gm44430-201ENSMUST00000203376 995 ntBASIC13.13□□□□□ -0.31
Ifna1P01572 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ifna1P01572 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.13□□□□□ -0.31
Ifna1P01572 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ifna1P01572 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.12□□□□□ -0.31
Ifna1P01572 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ifna1P01572 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ifna1P01572 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ifna1P01572 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ifna1P01572 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.12□□□□□ -0.31
Ifna1P01572 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.12□□□□□ -0.31
Ifna1P01572 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.12□□□□□ -0.31
Ifna1P01572 Gm6257-201ENSMUST00000163864 910 ntBASIC13.12□□□□□ -0.31
Ifna1P01572 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ifna1P01572 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ifna1P01572 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms