Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Matn4O89029 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Matn4O89029 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Matn4O89029 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Matn4O89029 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.7□□□□□ -0.06
Matn4O89029 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Matn4O89029 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.7□□□□□ -0.06
Matn4O89029 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Matn4O89029 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Matn4O89029 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Matn4O89029 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.69□□□□□ -0.06
Matn4O89029 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Matn4O89029 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.69□□□□□ -0.06
Matn4O89029 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Matn4O89029 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Matn4O89029 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Matn4O89029 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.69□□□□□ -0.06
Matn4O89029 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Matn4O89029 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Matn4O89029 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Matn4O89029 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.68□□□□□ -0.06
Matn4O89029 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Gm10013-201ENSMUST00000106074 672 ntBASIC14.68□□□□□ -0.06
Matn4O89029 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.68□□□□□ -0.06
Matn4O89029 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.68□□□□□ -0.06
Matn4O89029 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.68□□□□□ -0.06
Matn4O89029 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Matn4O89029 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Efs-202ENSMUST00000227037 2540 ntBASIC14.68□□□□□ -0.06
Matn4O89029 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.68□□□□□ -0.06
Matn4O89029 Sybu-209ENSMUST00000228639 4113 ntBASIC14.68□□□□□ -0.06
Matn4O89029 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Matn4O89029 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Matn4O89029 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Matn4O89029 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Matn4O89029 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Matn4O89029 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms