Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Sybu-209ENSMUST00000228639 4113 ntBASIC13.95□□□□□ -0.18
Hdac3O88895 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hdac3O88895 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hdac3O88895 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.95□□□□□ -0.18
Hdac3O88895 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Gm15794-201ENSMUST00000120182 631 ntBASIC13.95□□□□□ -0.18
Hdac3O88895 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.95□□□□□ -0.18
Hdac3O88895 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.95□□□□□ -0.18
Hdac3O88895 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.95□□□□□ -0.18
Hdac3O88895 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.95□□□□□ -0.18
Hdac3O88895 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.95□□□□□ -0.18
Hdac3O88895 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Hdac3O88895 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hdac3O88895 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hdac3O88895 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Gm13312-201ENSMUST00000119631 718 ntBASIC13.94□□□□□ -0.18
Hdac3O88895 Gm27742-201ENSMUST00000184667 60 ntBASIC13.94□□□□□ -0.18
Hdac3O88895 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.94□□□□□ -0.18
Hdac3O88895 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.94□□□□□ -0.18
Hdac3O88895 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hdac3O88895 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Hdac3O88895 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.94□□□□□ -0.18
Hdac3O88895 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hdac3O88895 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hdac3O88895 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hdac3O88895 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Hdac3O88895 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.93□□□□□ -0.18
Hdac3O88895 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.93□□□□□ -0.18
Hdac3O88895 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hdac3O88895 Gm27704-201ENSMUST00000185094 107 ntBASIC13.93□□□□□ -0.18
Hdac3O88895 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
Hdac3O88895 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.93□□□□□ -0.18
Hdac3O88895 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hdac3O88895 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hdac3O88895 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms