Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.2■□□□□ 0.82
Apaf1O88879 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.2■□□□□ 0.82
Apaf1O88879 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.2■□□□□ 0.82
Apaf1O88879 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apaf1O88879 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Apaf1O88879 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Apaf1O88879 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Apaf1O88879 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Apaf1O88879 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.19■□□□□ 0.82
Apaf1O88879 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.19■□□□□ 0.82
Apaf1O88879 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.19■□□□□ 0.82
Apaf1O88879 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apaf1O88879 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.18■□□□□ 0.82
Apaf1O88879 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Apaf1O88879 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.18■□□□□ 0.82
Apaf1O88879 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.18■□□□□ 0.82
Apaf1O88879 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.18■□□□□ 0.82
Apaf1O88879 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.18■□□□□ 0.82
Apaf1O88879 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.18■□□□□ 0.82
Apaf1O88879 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.18■□□□□ 0.82
Apaf1O88879 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.18■□□□□ 0.82
Apaf1O88879 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Apaf1O88879 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.18■□□□□ 0.82
Apaf1O88879 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.17■□□□□ 0.82
Apaf1O88879 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Apaf1O88879 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Apaf1O88879 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Apaf1O88879 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.17■□□□□ 0.82
Apaf1O88879 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Apaf1O88879 Gm14722-201ENSMUST00000118943 689 ntBASIC20.17■□□□□ 0.82
Apaf1O88879 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.17■□□□□ 0.82
Apaf1O88879 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Apaf1O88879 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apaf1O88879 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Apaf1O88879 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Gm8318-201ENSMUST00000182954 872 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.16■□□□□ 0.82
Apaf1O88879 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Apaf1O88879 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Apaf1O88879 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apaf1O88879 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms