Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20bO88575 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20bO88575 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Slc6a20bO88575 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Slc6a20bO88575 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a20bO88575 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.93■□□□□ 0.3
Slc6a20bO88575 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc6a20bO88575 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc6a20bO88575 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.93■□□□□ 0.3
Slc6a20bO88575 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Gm6973-201ENSMUST00000117080 721 ntBASIC16.92■□□□□ 0.3
Slc6a20bO88575 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc6a20bO88575 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Slc6a20bO88575 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.91■□□□□ 0.3
Slc6a20bO88575 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc6a20bO88575 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.91■□□□□ 0.3
Slc6a20bO88575 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a20bO88575 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a20bO88575 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.9■□□□□ 0.3
Slc6a20bO88575 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc6a20bO88575 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Haglr-201ENSMUST00000100000 2085 ntBASIC16.89■□□□□ 0.29
Slc6a20bO88575 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Gm13453-201ENSMUST00000118708 357 ntBASIC16.89■□□□□ 0.29
Slc6a20bO88575 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Mir7684-201ENSMUST00000183858 60 ntBASIC16.89■□□□□ 0.29
Slc6a20bO88575 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc6a20bO88575 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms