Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.33□□□□□ -0.28
Cldn1O88551 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cldn1O88551 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.33□□□□□ -0.28
Cldn1O88551 Gm18622-201ENSMUST00000219361 595 ntBASIC13.33□□□□□ -0.28
Cldn1O88551 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Cldn1O88551 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.33□□□□□ -0.28
Cldn1O88551 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cldn1O88551 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Cldn1O88551 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cldn1O88551 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Cldn1O88551 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cldn1O88551 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cldn1O88551 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.32□□□□□ -0.28
Cldn1O88551 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.32□□□□□ -0.28
Cldn1O88551 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Gm44492-201ENSMUST00000197012 141 ntBASIC13.32□□□□□ -0.28
Cldn1O88551 Gm20949-201ENSMUST00000206478 952 ntBASIC13.32□□□□□ -0.28
Cldn1O88551 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.32□□□□□ -0.28
Cldn1O88551 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.32□□□□□ -0.28
Cldn1O88551 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.32□□□□□ -0.28
Cldn1O88551 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cldn1O88551 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.32□□□□□ -0.28
Cldn1O88551 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cldn1O88551 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cldn1O88551 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Cldn1O88551 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.31□□□□□ -0.28
Cldn1O88551 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.31□□□□□ -0.28
Cldn1O88551 Gm4899-201ENSMUST00000178708 719 ntBASIC13.31□□□□□ -0.28
Cldn1O88551 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.31□□□□□ -0.28
Cldn1O88551 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cldn1O88551 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.31□□□□□ -0.28
Cldn1O88551 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cldn1O88551 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.31□□□□□ -0.28
Cldn1O88551 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cldn1O88551 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.31□□□□□ -0.28
Cldn1O88551 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms