Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops4O88544 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.41□□□□□ -0.1
Cops4O88544 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Gm18421-201ENSMUST00000204122 625 ntBASIC14.41□□□□□ -0.1
Cops4O88544 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cops4O88544 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cops4O88544 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops4O88544 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops4O88544 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cops4O88544 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.4□□□□□ -0.1
Cops4O88544 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops4O88544 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Cops4O88544 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.4□□□□□ -0.1
Cops4O88544 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops4O88544 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.4□□□□□ -0.1
Cops4O88544 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops4O88544 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cops4O88544 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops4O88544 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.39□□□□□ -0.11
Cops4O88544 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cops4O88544 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops4O88544 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cops4O88544 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cops4O88544 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cops4O88544 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops4O88544 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops4O88544 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.38□□□□□ -0.11
Cops4O88544 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cops4O88544 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms