Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Mir6404-201ENSMUST00000183699 94 ntBASIC13.97□□□□□ -0.17
Cops3O88543 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.97□□□□□ -0.17
Cops3O88543 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.97□□□□□ -0.17
Cops3O88543 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cops3O88543 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cops3O88543 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.97□□□□□ -0.17
Cops3O88543 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cops3O88543 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cops3O88543 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.96□□□□□ -0.17
Cops3O88543 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cops3O88543 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cops3O88543 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cops3O88543 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Gm18032-201ENSMUST00000222541 538 ntBASIC13.96□□□□□ -0.17
Cops3O88543 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.96□□□□□ -0.17
Cops3O88543 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cops3O88543 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.96□□□□□ -0.17
Cops3O88543 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cops3O88543 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.96□□□□□ -0.17
Cops3O88543 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops3O88543 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops3O88543 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops3O88543 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Cops3O88543 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cops3O88543 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cops3O88543 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cops3O88543 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.95□□□□□ -0.18
Cops3O88543 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.95□□□□□ -0.18
Cops3O88543 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cops3O88543 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cops3O88543 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.95□□□□□ -0.18
Cops3O88543 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cops3O88543 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Cops3O88543 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops3O88543 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cops3O88543 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cops3O88543 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.94□□□□□ -0.18
Cops3O88543 Gm6433-201ENSMUST00000118634 875 ntBASIC13.94□□□□□ -0.18
Cops3O88543 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.94□□□□□ -0.18
Cops3O88543 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops3O88543 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms