Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfdp1O88271 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cfdp1O88271 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cfdp1O88271 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cfdp1O88271 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cfdp1O88271 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.37■□□□□ 0.69
Cfdp1O88271 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.37■□□□□ 0.69
Cfdp1O88271 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.37■□□□□ 0.69
Cfdp1O88271 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.37■□□□□ 0.69
Cfdp1O88271 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cfdp1O88271 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.37■□□□□ 0.69
Cfdp1O88271 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Gm11779-201ENSMUST00000118541 368 ntBASIC19.36■□□□□ 0.69
Cfdp1O88271 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Gm18489-201ENSMUST00000172565 551 ntBASIC19.36■□□□□ 0.69
Cfdp1O88271 Gm9682-201ENSMUST00000197505 556 ntBASIC19.36■□□□□ 0.69
Cfdp1O88271 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.36■□□□□ 0.69
Cfdp1O88271 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.36■□□□□ 0.69
Cfdp1O88271 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cfdp1O88271 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfdp1O88271 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cfdp1O88271 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cfdp1O88271 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cfdp1O88271 Gm12260-201ENSMUST00000122447 411 ntBASIC19.35■□□□□ 0.69
Cfdp1O88271 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.35■□□□□ 0.69
Cfdp1O88271 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
Cfdp1O88271 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfdp1O88271 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 App-207ENSMUST00000227737 2827 ntBASIC19.34■□□□□ 0.69
Cfdp1O88271 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cfdp1O88271 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cfdp1O88271 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cfdp1O88271 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.34■□□□□ 0.69
Cfdp1O88271 Gm8000-201ENSMUST00000188378 592 ntBASIC19.34■□□□□ 0.69
Cfdp1O88271 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfdp1O88271 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfdp1O88271 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfdp1O88271 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfdp1O88271 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cfdp1O88271 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms